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Note: Links lead to the DBLP on the Web. Alfonso Valencia Alfonso Valencia, Alex Bateman : Increasing the Impact of Bioinformatics . Bioinformatics 21 (1): 1-1 (2005) Manuel Gómez , Ramón Alonso-Allende , Florencio Pazos , Osvaldo Graña , David Juan , Alfonso Valencia: Accessible Protein Interaction Data for Network Modeling. Structure of the Information and Available Repositories. T. Comp. Sys. Biology 1 : 1-13 (2005) Florencio Pazos , David Guijas , Manuel J. Gomez , Almudena Trigo , Victor de Lorenzo , Alfonso Valencia: The Biodegradation Network, a New Scenario for Computational Systems Biology Research. CMSB 2004 : 252-256 José María Fernández , Alfonso Valencia: XML Databases, are Ready for Bioinformatics? Spanish Bioinformatics Conference 2004 : 166-170 Ana M. Rojas , Luis Sánchez-Pulido , Agnes Fütterer , Karel H. M. van Wely , Carlos Martínez-A , Alfonso Valencia: Bioinformatic Analyses of the Dio Family of Proteins. Spanish Bioinformatics Conference 2004 : 70-71 Alex Bateman , Alfonso Valencia: New Leadership for Bioinformatics. Bioinformatics 20 (12): 1821 (2004) José María Fernández , Alfonso Valencia: YAdumper: extracting and translating large information volumes from relational databases to structured flat files. Bioinformatics 20 (15): 2455-2457 (2004) Michael L. Tress , Osvaldo Graña , Alfonso Valencia: SQUARE-determining reliable regions in sequence alignments. Bioinformatics 20 (6): 974-975 (2004) Henning Hermjakob , Luisa Montecchi-Palazzi , Chris Lewington , Sugath Mudali , Samuel Kerrien , Sandra E. Orchard , Martin Vingron , Bernd Roechert , Peter Roepstorff , Alfonso Valencia, Hanah Margalit , John Armstrong , Amos Bairoch , Gianni Cesareni , David Sherman , Rolf Apweiler : IntAct: an open source molecular interaction database. Nucleic Acids Research 32 (Database-Issue): 452-455 (2004) Christos A. Ouzounis , Alfonso Valencia: Early bioinformatics: the birth of a discipline - a personal view. Bioinformatics 19 (17): 2176-2190 (2003) Ioannis Iliopoulos , Sophia Tsoka , Miguel A. Andrade , Anton J. Enright , Mark Carroll , Patrick Poullet , Vassilis J. Promponas , Theodore Liakopoulos , Giorgos Palaios , Claude Pasquier , Stavros J. Hamodrakas , Javier Tamames , Asutosh T. Yagnik , Anna Tramontano , Damien Devos , Christian Blaschke , Alfonso Valencia, David Brett , David Martin , Christophe Leroy , Isidore Rigoutsos , Chris Sander , Christos A. Ouzounis : Evaluation of annotation strategies using an entire genome sequence. Bioinformatics 19 (6): 717-726 (2003) Alfonso Valencia: Meta, Metan and Cyber Servers. Bioinformatics 19 (7): 795 (2003) Ingrid Y. Y. Koh , Volker A. Eyrich , Marc A. Martí-Renom , Dariusz Przybylski , Mallur S. Madhusudhan , Narayanan Eswar , Osvaldo Graña , Florencio Pazos , Alfonso Valencia, Andrej Sali , Burkhard Rost : EVA: evaluation of protein structure prediction servers. Nucleic Acids Research 31 (13): 3311-3315 (2003) Alfonso Valencia: Bioinformatics: Biology by other means. Bioinformatics 18 (12): 1551-1552 (2002) Burkhard Rost , Barry Honig , Alfonso Valencia: Bioinformatics in structural genomics - Editorial. Bioinformatics 18 (7): 897 (2002) Federico Abascal , Alfonso Valencia: Clustering of proximal sequence space for the identification of protein families. Bioinformatics 18 (7): 908-921 (2002) Christian Blaschke , Lynette Hirschman , Alfonso Valencia: Information extraction in molecular biology. Briefings in Bioinformatics 3 (2): 154-165 (2002) Christian Blaschke , Alfonso Valencia: The Frame-Based Module of the SUISEKI Information Extraction System. IEEE Intelligent Systems 17 (2): 14-20 (2002) Javier Herrero , Alfonso Valencia, Joaquín Dopazo : A hierarchical unsupervised growing neural network for clustering gene expression patterns. Bioinformatics 17 (1): 126-136 (2001) Volker A. Eyrich , Marc A. Martí-Renom , Dariusz Przybylski , Mallur S. Madhusudhan , András Fiser , Florencio Pazos , Alfonso Valencia, Andrej Sali , Burkhard Rost : EVA: continuous automatic evaluation of protein structure prediction servers. Bioinformatics 17 (12): 1242-1243 (2001) Russ B. Altman , Alfonso Valencia, Satoru Miyano , Shoba Ranganathan : Challenges for Intelligent Systems in Biology. IEEE Intelligent Systems 16 (6): 14-20 (2001) Christian Blaschke , Miguel A. Andrade , Christos A. Ouzounis , Alfonso Valencia: Automatic Extraction of Biological Information from Scientific Text: Protein-Protein Interactions. ISMB 1999 : 60-67 Florencio Pazos , Burkhard Rost , Alfonso Valencia: A platform for integrating threading results with protein family analyses. Bioinformatics 15 (12): 1062-1063 (1999) Miguel A. Andrade , N. P. Brown , Christophe Leroy , S. Hoersch , Antoine de Daruvar , C. Reich , A. Franchini , Javier Tamames , Alfonso Valencia, Christos A. Ouzounis , Chris Sander : Automated genome sequence analysis and annotation. Bioinformatics 15 (5): 391-412 (1999) Oswaldo Trelles , Miguel A. Andrade , Alfonso Valencia, Emilio L. Zapata , José María Carazo : Computational space reduction and parallelization of a new clustering approach for large groups of sequences. Bioinformatics 14 (5): 439-451 (1998) Javier Tamames , Christos A. Ouzounis , Georg Casari , Chris Sander , Alfonso Valencia: EUCLID: automatic classification of proteins in functional classes by their database annotations. Bioinformatics 14 (6): 542-543 (1998) Miguel A. Andrade , Alfonso Valencia: Automatic extraction of keywords from scientific text: application to the knowledge domain of protein families. Bioinformatics 14 (7): 600-607 (1998) Terry Gaasterland , Peter D. Karp , Kevin Karplus , Christos A. Ouzounis , Chris Sander , Alfonso Valencia: Proceedings of the 5th International Conference on Intelligent Systems for Molecular Biology, Halkidiki, Greece, June 21-26, 1997 AAAI 1997 Florencio Pazos , Luis Sánchez-Pulido , Juan A. Garcia-Ranca , Miguel A. Andrade , Silvia Atrian , Alfonso Valencia: Comparative Analysis of Different Methods for the Detection of Specificity Regions in Protein Families. BCEC 1997 : 132-145 Miguel A. Andrade , Alfonso Valencia: Automatic Annotation for Biological Sequences by Etraction of Keywords from MEDLINE Abstracts: Development of a Prototype System. ISMB 1997 : 25-32 Florencio Pazos , O. Olmea , Alfonso Valencia: A graphical interface for correlated mutations and other protein structure prediction methods. Computer Applications in the Biosciences 13 (3): 319-321 (1997) Miguel A. Andrade , Georg Casari , Antoine de Daruvar , Chris Sander , Reinhard Schneider , Javier Tamames , Alfonso Valencia, Christos A. Ouzounis : Sequence analysis of the Methanococcus jannaschii genome and the prediction of protein function. Computer Applications in the Biosciences 13 (4): 481-483 (1997) Christos A. Ouzounis , Alfonso Valencia, Javier Tamames , Peer Bork , Chris Sander : The Functional Composition of Living Machines as a Design Principle for Artificial Organisms. ECAL 1995 : 843-851 Michael Scharf , Reinhard Schneider , Georg Casari , Peer Bork , Alfonso Valencia, Christos A. Ouzounis , Chris Sander : GeneQuiz: A Workbench for Sequence Analysis. ISMB 1994 : 348-353 1 [ 19 ] 2 [ 33 ] 3 [ 14 ] 4 [ 3 ] [ 5 ] [ 6 ] [ 8 ] [ 10 ] [ 11 ] [ 13 ] [ 24 ] 5 [ 26 ] 6 [ 26 ] 7 [ 6 ] 8 [ 26 ] 9 [ 29 ] [ 34 ] 10 [ 13 ] [ 17 ] [ 18 ] [ 24 ] 11 [ 1 ] [ 2 ] 12 [ 24 ] 13 [ 11 ] 14 [ 10 ] 15 [ 24 ] 16 [ 1 ] [ 3 ] [ 9 ] 17 [ 26 ] 18 [ 3 ] [ 11 ] 19 [ 24 ] 20 [ 16 ] 21 [ 24 ] 22 [ 22 ] 23 [ 15 ] [ 22 ] 24 [ 28 ] [ 31 ] 25 [ 15 ] 26 [ 11 ] 27 [ 30 ] 28 [ 7 ] 29 [ 6 ] 30 [ 33 ] 31 [ 32 ] 32 [ 22 ] [ 27 ] [ 33 ] 33 [ 32 ] 34 [ 24 ] 35 [ 26 ] 36 [ 16 ] 37 [ 18 ] 38 [ 11 ] 39 [ 20 ] 40 [ 24 ] 41 [ 33 ] 42 [ 7 ] 43 [ 7 ] 44 [ 26 ] 45 [ 22 ] 46 [ 11 ] [ 24 ] 47 [ 26 ] 48 [ 24 ] 49 [ 32 ] 50 [ 15 ] [ 22 ] 51 [ 26 ] 52 [ 15 ] [ 22 ] 53 [ 24 ] 54 [ 30 ] 55 [ 14 ] 56 [ 26 ] 57 [ 26 ] 58 [ 4 ] 59 [ 26 ] 60 [ 1 ] [ 2 ] [ 3 ] [ 7 ] [ 9 ] [ 11 ] [ 13 ] [ 24 ] [ 25 ] 61 [ 24 ] 62 [ 24 ] 63 [ 4 ] [ 6 ] [ 12 ] [ 15 ] [ 22 ] [ 32 ] [ 33 ] 64 [ 24 ] 65 [ 24 ] 66 [ 15 ] [ 22 ] 67 [ 14 ] 68 [ 11 ] 69 [ 24 ] 70 [ 26 ] 71 [ 26 ] 72 [ 30 ] 73 [ 12 ] [ 15 ] [ 20 ] [ 22 ] 74 [ 15 ] [ 22 ] 75 [ 6 ] [ 30 ] 76 [ 1 ] [ 2 ] [ 3 ] [ 7 ] [ 9 ] [ 11 ] [ 24 ] 77 [ 1 ] 78 [ 1 ] [ 3 ] 79 [ 26 ] 80 [ 2 ] [ 3 ] [ 9 ] [ 11 ] [ 24 ] 81 [ 24 ] 82 [ 10 ] 83 [ 27 ] 84 [ 32 ] 85 [ 24 ] 86 [ 26 ] 87 [ 30 ] 88 [ 24 ] 89 [ 10 ]  ©2005 Association for Computing Machinery |
