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Jason Tsong-Li Wang

Papers on DiSC'03


Algorithmics and Applications of Tree and Graph Searching

Mining Genes in DNA Using GeneScout

BIOKDD01: Workshop on Data Mining in Bioinformatics

BIOKDD 2002: Recent Advanced in Data Minig for Bioinformatics

A Structure-Based Search Engine for Phylogenetic Databases

ATreeGrep: Approximate Searching in Unordered Trees

Publications


Note: Links lead to the DBLP on the Web.

Jason Tsong-Li Wang

65 Mohammed Javeed Zaki , Jason Tsong-Li Wang, Hannu Toivonen : Proceedings of the 3nd ACM SIGKDD Workshop on Data Mining in Bioinformatics (BIOKDD 2003), August 27th, 2003, Washington, DC, USA. University of Alberta 2003

64 Jason Tsong-Li Wang, Cathy H. Wu , Paul P. Wang : Computational Biology and Genome Informatics. World Scientific 2003

63 Mohammed Javeed Zaki , Jason Tsong-Li Wang, Hannu Toivonen : Opening Remarks. BIOKDD 2003

62 Xiong Wang , Jason Tsong-Li Wang: Protein Classification: A Geometric Hashing Approach. Computational Biology and Genome Informatics 2003 : 163-181

61 Mohammed Javeed Zaki , Jason Tsong-Li Wang: Special issue on data management in bioinformatics. Information Systems 28 (4): 241-242 (2003)

60 Mohammed Javeed Zaki , Jason Tsong-Li Wang, Hannu Toivonen : Proceedings of the 2nd ACM SIGKDD Workshop on Data Mining in Bioinformatics (BIOKDD 2002), July 23rd, 2002, Edmonton, Alberta, Canada. University of Alberta 2002

59 Sen Zhang , Li Liao , Jean-Francois Tomb , Jason Tsong-Li Wang: Clustering and Classifying Enzymes in Metabolic Pathways: Some Preliminary Results. BIOKDD 2002 : 19-24

58 Mohammed Javeed Zaki , Jason Tsong-Li Wang, Hannu Toivonen : Foreword. BIOKDD 2002

57 Michael M. Yin , Jason Tsong-Li Wang: Mining Genes in DNA Using GeneScout. ICDM 2002 : 733-736

56 Dennis Shasha , Jason Tsong-Li Wang, Rosalba Giugno : Algorithmics and Applications of Tree and Graph Searching. PODS 2002 : 39-52

55 Huiyuan Shan , Katherine G. Herbert , William H. Piel , Dennis Shasha , Jason Tsong-Li Wang: A Structure-Based Search Engine for Phylogenetic Databases. SSDBM 2002 : 7-10

54 Dennis Shasha , Jason Tsong-Li Wang, Huiyuan Shan , Kaizhong Zhang : ATreeGrep: Approximate Searching in Unordered Trees. SSDBM 2002 : 89-98

53 Sen Zhang , Jason Tsong-Li Wang, Katherine G. Herbert : XML Query by Example. International Journal of Computational Intelligence and Applications 2 (3): 329-337 (2002)

52 Mohammed Javeed Zaki , Jason Tsong-Li Wang, Hannu Toivonen : BIOKDD01: Workshop on Data Mining in Bioinformatics. SIGKDD Explorations 3 (2): 71-73 (2002)

51 Mohammed Javeed Zaki , Jason Tsong-Li Wang, Hannu Toivonen : BIOKDD 2002: Recent Advanced in Data Minig for Bioinformatics. SIGKDD Explorations 4 (2): 112-114 (2002)

50 Xiong Wang , Jason Tsong-Li Wang, Dennis Shasha , Bruce A. Shapiro , Isidore Rigoutsos , Kaizhong Zhang : Finding Patterns in Three-Dimensional Graphs: Algorithms and Applications to Scientific Data Mining. TKDE 14 (4): 731-749 (2002)

49 George Chang , Marcus J. Healey , James A. M. McHugh , Jason Tsong-Li Wang: Mining the World Wide Web: An Information Search Approach. Kluwer 2001

48 Mohammed Javeed Zaki , Hannu Toivonen , Jason Tsong-Li Wang: Proceedings of the ACM SIGKDD Workshop on Data Mining in Bioinformatics (BIOKDD 2001). University of Alberta 2001

47 Jason Tsong-Li Wang, Qicheng Ma , Dennis Shasha , Cathy H. Wu : New techniques for extracting features from protein sequences. IBM Systems Journal 40 (2): 426-441 (2001)

46 James R. Gattiker , Jason Tsong-Li Wang, Paul P. Wang : Bioinformatics - Introduction to the Special Issue. Information Sciences 139 (1-2): 1-2 (2001)

45 Michael M. Yin , Jason Tsong-Li Wang: Effective hidden Markov models for detecting splicing junction sites in DNA sequences. Information Sciences 139 (1-2): 139-163 (2001)

44 George Chang , Gunjan Samtani , Marcus L. Healey , Franz Kurfess , Jason Tsong-Li Wang: Precise Environmental Searches: Integrating Hierarchical Information Search with EnviroDaemon. Journal of Systems Integration 10 (3): 253-267 (2001)

43 Jason Tsong-Li Wang, Qicheng Ma , Dennis Shasha , Cathy H. Wu : Application of neural networks to biological data mining: a case study in protein sequence classification. KDD 2000 : 305-309

42 Jason Tsong-Li Wang, Xiong Wang , Dennis Shasha , Bruce A. Shapiro , Kaizhong Zhang , Xinhuan Zheng , Qicheng Ma , Zasha Weinberg : An Approximate Search Engine for Structural Databases. SIGMOD Conference 2000 : 584

41 Jason Tsong-Li Wang, Kaizhong Zhang : Identifying consensus of trees through alignment. Information Sciences 126 (1-4): 165-189 (2000)

40 Xiong Wang , Jason Tsong-Li Wang: Fast Similarity Search in Three-Dimensional Structure Databases. Journal of Chemical Information and Computer Sciences 40 (2): 442-451 (2000)

39 Xiong Wang , Jason Tsong-Li Wang, King-Ip Lin , Dennis Shasha , Bruce A. Shapiro , Kaizhong Zhang : An Index Structure for Data Mining and Clustering. Knowledge and Information Systems 2 (2): 161-184 (2000)

38 Jason Tsong-Li Wang, Bruce A. Shapiro , Dennis Shasha : Pattern Discovery in Biomolecular Data: Tools, Techniques and Applications. Oxford University Press 1999

37 Jason Tsong-Li Wang, Xiong Wang , King-Ip Lin , Dennis Shasha , Bruce A. Shapiro , Kaizhong Zhang : Evaluating a Class of Distance-Mapping Algorithms for Data Mining and Clustering. KDD 1999 : 307-311

36 Bin Li , Dennis Shasha , Jason Tsong-Li Wang: A Framework for Biological Pattern Discovery on Networks of Workstations. Pattern Discovery in Biomolecular Data 1999 : 133-144

35 Jason Tsong-Li Wang, Thomas G. Marr , Steve Rozen , Dennis Shasha : Pattern Discovery and Classification in Biosequences. Pattern Discovery in Biomolecular Data 1999 : 55-74

34 Jason Tsong-Li Wang, Kaizhong Zhang , Chia-Yo Chang : Identifying Approximately Common Substructures in Trees Based on a Restricted Edit Distance. Information Sciences 121 (3-4): 367-386 (1999)

33 James R. Gattiker , Jason Tsong-Li Wang: Biocomputing - Introduction to the Special Issue. International Journal on Artificial Intelligence Tools 8 (4): 361-362 (1999)

32 Qicheng Ma , Jason Tsong-Li Wang: Biological Data Mining Using Bayesian Neural Networks: A Case Study. International Journal on Artificial Intelligence Tools 8 (4): 433-452 (1999)

31 Jason Tsong-Li Wang, Steve Rozen , Bruce A. Shapiro , Dennis Shasha , Zhiyuan Wang , Maisheng Yin : New Techniques for DNA Sequence Classification. Journal of Computational Biology 6 (2): 209-218 (1999)

30 Yanling Yang , Kaizhong Zhang , Xiong Wang , Jason Tsong-Li Wang, Dennis Shasha : An Approximate Oracle for Distance in Metric Spaces. CPM 1998 : 104-117

29 Jason Tsong-Li Wang, Bruce A. Shapiro , Dennis Shasha , Kaizhong Zhang , Kathleen M. Currey : An Algorithm for Finding the Largest Approximately Common Substructures of Two Trees. IEEE Transactions on Pattern Analysis and Machine Intelligence 20 (8): 889-895 (1998)

28 George Jyh-Shian Chang , Girish Patel , Liam Relihan , Jason Tsong-Li Wang: A graphical environment for change detection in structured documents. COMPSAC 1997 : 536-541

27 Gung-Wei Chirn , Jason Tsong-Li Wang, Zhiyuan Wang : Scientific Data Classification: A Case Study. ICTAI 1997 : 216-

26 Xiong Wang , Jason Tsong-Li Wang, Dennis Shasha , Bruce A. Shapiro , Sitaram Dikshitulu , Isidore Rigoutsos , Kaizhong Zhang : Automated Discovery of Active Motifs in Three Dimensional Molecules. KDD 1997 : 89-95

25 Jason Tsong-Li Wang, Dennis Shasha , George Jyh-Shian Chang , Liam Relihan , Kaizhong Zhang , Girish Patel : Structural Matching and Discovery in Document Databases. SIGMOD Conference 1997 : 560-563

24 Ching-Song Wei , Qianhong Liu , Jason Tsong-Li Wang, Peter A. Ng : Knowledge Discovering for Document Classification Using Tree Matching in TEXPROS. Information Sciences 100 (1-4): 255-310 (1997)

23 Jason Tsong-Li Wang, Bruce A. Shapiro , Dennis Shasha , Kaizhong Zhang , Chia-Yo Chang : Automated Discovery of Active Motifs in Multiple RNA Secondary Structures. KDD 1996 : 70-75

22 Chia-Yo Chang , Jason Tsong-Li Wang: Scientific Data Mining: A Case Study. SEKE 1996 : 100-107

21 George Jyh-Shian Chang , Jason Tsong-Li Wang, Gung-Wei Chirn , Chia-Yo Chang , Weihong Wu , Firas Aljallad : A Visualization Tool for Pattern Matching and Discovery in Scientific Databases. SEKE 1996 : 563-570

20 Xiaolong Hao , Jason Tsong-Li Wang, Peter A. Ng : Information Extraction from the Structured Part of Office Documents. Information Sciences 91 (3): 245-274 (1996)

19 Kaizhong Zhang , Jason Tsong-Li Wang, Dennis Shasha : On the Editing Distance Between Undirected Acyclic Graphs. International Journal of Foundations of Computer Science 7 (1): 43-58 (1996)

18 Gang Zhou , Jason Tsong-Li Wang, Peter A. Ng : Curriculum Knowledge Representation and Manipulation in Knowledge-Based Tutoring Systems. TKDE 8 (5): 679-689 (1996)

17 Kaizhong Zhang , Jason Tsong-Li Wang, Dennis Shasha : On the Editing Distance between Undirected Acyclic Graphs and Related Problems. CPM 1995 : 395-407

16 Jiangling Wan , Michael P. Bieber , Jason Tsong-Li Wang, Peter A. Ng : LHM: a logic-based hypertext data model for integrating hypertext and information systems. HICSS (3) 1995 : 350-

15 Jason Tsong-Li Wang, Kaizhong Zhang , Dennis Shasha : Pattern Matching and Pattern Discovery in Scientific, Program, and Document Databases. SIGMOD Conference 1995 : 487

14 Fortune S. Mhlanga , Zhijian Zhu , Jason Tsong-Li Wang, Peter A. Ng : A New Approach to Modeling Personal Office Documents. DKE 17 (2): 127-158 (1995)

13 Jason Tsong-Li Wang, Kaizhong Zhang , Gung-Wei Chirn : Algorithms for Approximate Graph Matching. Information Sciences 82 (1-2): 45-74 (1995)

12 Jiangling Wan , Michael P. Bieber , Jason Tsong-Li Wang, Peter A. Ng : Document Management Through Hypertext: A Logic Modeling Approach. HICSS (3) 1994 : 558-568

11 Gang Zhou , Jason Tsong-Li Wang, Peter A. Ng : A Knowledge-Based Tutoring System for SQL Programming. ICTAI 1994 : 352-358

10 Jason Tsong-Li Wang, Kaizhong Zhang , Gung-Wei Chirn : Approximate Graph Matching Using Probabilistic Hill Climbing Algorithms. ICTAI 1994 : 390-396

9 Jason Tsong-Li Wang, Gung-Wei Chirn , Thomas G. Marr , Bruce A. Shapiro , Dennis Shasha , Kaizhong Zhang : Combinatorial Pattern Discovery for Scientific Data: Some Preliminary Results. SIGMOD Conference 1994 : 115-125

8 Kaizhong Zhang , Dennis Shasha , Jason Tsong-Li Wang: Approximate Tree Matching in the Presence of Variable Length Don't Cares. J. Algorithms 16 (1): 33-66 (1994)

7 Jason Tsong-Li Wang, Kaizhong Zhang , Karpjoo Jeong , Dennis Shasha : A System for Approximate Tree Matching. TKDE 6 (4): 559-571 (1994)

6 Xiaolong Hao , Jason Tsong-Li Wang, Michael P. Bieber , Peter A. Ng : A Tool for Classifying Office Documents. ICTAI 1993 : 427-434

5 Kaizhong Zhang , Dennis Shasha , Jason Tsong-Li Wang: Fast Serial and Parallel Algorithms for Approximate Tree Matching with VLDC's. CPM 1992 : 151-161

4 Dennis Shasha , Jason Tsong-Li Wang, Kaizhong Zhang , Frank Yeong-Chyang Shih : Pattern Matching in Unordered Trees. ICTAI 1992 : 352-361

3 Dennis Shasha , Jason Tsong-Li Wang: Optimizing Equijoin Queries In Distributed Databases Where Relations Are Hash Partitioned. TODS 16 (2): 279-308 (1991)

2 Jason Tsong-Li Wang, Dennis Shasha : Query Processing for Distance Metrics. VLDB 1990 : 602-613

1 Dennis Shasha , Jason Tsong-Li Wang: New Techniques for Best-Match Retrieval. TOIS 8 (2): 140-158 (1990)




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